Cba_g08147

Description : RNA chaperone *(RZ1) & original description: none

Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g08147

Target	Alias	Description	ECC score	Gene Family Method
AT1G60650	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein with...	0.03	OrthoFinder output from all 47 species
Aob_g06479	No alias	RNA chaperone *(RZ1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21798	No alias	RNA chaperone *(RZ1) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g55211	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.09G066000.1	Ceric.09G066000	RNA chaperone *(RZ1) & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01001672001	ATRZ-1A	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_07052	No alias	RNA editing factor (ORRM)	0.04	OrthoFinder output from all 47 species
Msp_g12890	No alias	RNA chaperone *(RZ1) & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g19209	CCR1, GR-RBP8,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g29740	GR-RBP5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g00653	GR-RBP5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e012299_P004	CCR2, ATGRP7,...	RNA chaperone (RZ1\|GR-RBP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	105	172
IPR001878	Znf_CCHC	220	235

External Links

No external refs found!