Cba_g08202


Description : not classified & original description: none


Gene families : OG0002877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002877_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08202

Target Alias Description ECC score Gene Family Method Actions
Adi_g022513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013923 No alias not classified & original description: CDS=1-507 0.03 OrthoFinder output from all 47 species
Tin_g32916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 72 98
IPR002885 Pentatricopeptide_repeat 1 42
No external refs found!