Cba_g08373

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g08373

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00122360	BCS1,...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00244450	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28510 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00036p00176790	BCS1,...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT5G57480	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Ala_g04656	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g12787	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cre05.g234661	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01008088001	No alias	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01010372001	No alias	AAA-ATPase At2g18193 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01018890001	BCS1	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01023336001	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01032553001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_11779	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os10g37500.1	LOC_Os10g37500	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_72725g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pir_g08375	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26527	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g096230.4.1	Solyc01g096230	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Spa_g26231	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013139_P001	Zm00001e013139	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004470	malic enzyme activity	IEP	HCCA
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	69	192
IPR003959	ATPase_AAA_core	311	464

External Links

No external refs found!

Cba_g08373

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation