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  5. Cba_g08516

Cba_g08516


Description : not classified & original description: none


Gene families : OG0006605 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08516
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Als_g23641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G064500.1 Ceric.15G064500 not classified & original description: pacid=50640277... 0.09 OrthoFinder output from all 47 species
Cre14.g618050 No alias Probable plastid-lipid-associated protein 11,... 0.01 OrthoFinder output from all 47 species
Dac_g16122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018209001 No alias Probable plastid-lipid-associated protein 11,... 0.03 OrthoFinder output from all 47 species
Gb_15264 No alias Probable plastid-lipid-associated protein 11,... 0.04 OrthoFinder output from all 47 species
MA_75636g0010 No alias Probable plastid-lipid-associated protein 11,... 0.04 OrthoFinder output from all 47 species
Msp_g07907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08873 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022386 No alias not classified & original description: CDS=98-1027 0.03 OrthoFinder output from all 47 species
Zm00001e016094_P002 Zm00001e016094 Probable plastid-lipid-associated protein 11,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 57 220
No external refs found!