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  5. Cba_g09039

Cba_g09039


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g09039

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Als_g20554 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g23705 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20145 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14328.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene33723.t1 Aspi01Gene33723 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40313.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59741.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59741.t2 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021000.1 KAN, KAN1,... KANADI-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04642 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10311 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04709 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g06998 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g11330.1 No alias G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Msp_g12599 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c10_24540V3.1 Pp3c10_24540 myb-like HTH transcriptional regulator family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007773 PHL1 not classified & original description: CDS=638-1480 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.03 OrthoFinder output from all 47 species
Solyc04g008480.2.1 Solyc04g008480 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc08g076400.3.1 KAN2, Solyc08g076400 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g078720.2.1 Solyc10g078720 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g18841 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19684 No alias transcription factor *(CLAUSA) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e003093_P001 KAN4, ATS, Zm00001e003093 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e022412_P003 KAN2, Zm00001e022412 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 38 88
No external refs found!