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  5. Cba_g09530

Cba_g09530


Description : not classified & original description: none


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g09530
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g07082 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g02366 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g03113 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15641 BBD1, ATBBD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.09G019300.1 BBD1, ATBBD1,... not classified & original description: pacid=50586572... 0.02 OrthoFinder output from all 47 species
Dac_g24289 BBD1, ATBBD1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g28499 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21453 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g50622.1 LOC_Os01g50622 Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g43856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31557 BBD1, ATBBD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11428 BBD1, ATBBD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g33906 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02503 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09798 BBD1, ATBBD1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05101 BBD1, ATBBD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29925 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018013_P001 Zm00001e018013 Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 143 253
No external refs found!