Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16
Description : alpha-class expansin & original description: none
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g09595 | |
| Cluster | HCCA: Cluster_224 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G20190 | ATEXPA11, ATHEXP... | expansin 11 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G26770 | ATEXPA10,... | expansin A10 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G20750 | EXPB1, ATEXPB1,... | expansin B1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G29030 | EXP5, ATHEXP... | expansin A5 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G01630 | ATHEXP ALPHA... | expansin A17 | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17770 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene45683.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0041.g026744 | EXPA16, ATHEXP... | alpha-class expansin & original description: CDS=9-821 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G061800.1 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14507 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g16559 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030375001 | EXPB3, ATEXPB3,... | Cell wall.cell wall proteins.expansins.beta-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07438 | No alias | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g42650.1 | EXPB3, ATEXPB3,... | beta-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g49410.1 | ATEXP13,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g50960.1 | ATEXPL2, EXPL2,... | Expansin-like A4 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| MA_100868g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| MA_114349g0010 | ATEXPA10,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g20420.1 | EXPA16, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30056 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31444 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006536 | ATEXPA10,... | alpha-class expansin & original description: CDS=1521-2813 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28732 | No alias | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g47903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g010890.4.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g088100.3.1 | ATEXPA10,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03664 | EXP15, ATEXPA15,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003888_P001 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003889_P001 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013311_P001 | ATEXLA1, EXPL1,... | Expansin-like A4 OS=Oryza sativa subsp. japonica... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e014220_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041376_P001 | ATEXP13,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
| MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
| No external refs found! |
