Cba_g10141


Description : type-1A topoisomerase TOP3b & original description: none


Gene families : OG0002141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00202p00033660 AtTOP3alpha,... Cell cycle.mitosis and meiosis.meiotic... 0.04 OrthoFinder output from all 47 species
Als_g10803 AtTOP3alpha, TOP3A topoisomerase component *(TOP3-alpha) of RTR Holliday... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29065.t1 Aspi01Gene29065 type-1A topoisomerase TOP3b & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g02630.1 AtTOP3alpha, TOP3A topoisomerase component TOP3-alpha of RTR Holliday... 0.03 OrthoFinder output from all 47 species
Solyc09g097880.4.1 Solyc09g097880 topoisomerase component TOP3b of TDRD3-TOP3B... 0.03 OrthoFinder output from all 47 species
Tin_g13785 AtTOP3alpha, TOP3A topoisomerase component *(TOP3-alpha) of RTR Holliday... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR013497 Topo_IA_cen 184 595
IPR006171 TOPRIM_domain 27 169
No external refs found!