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  5. Cba_g10228

Cba_g10228


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10228

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00125480 KAN2,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g08342 KAN, KAN1 KANADI-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48429.t1 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46936 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06613 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01026319001 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06370.1 KAN2, LOC_Os08g06370 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g50093 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21035 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g049640.3.1 APL, WDY, Solyc07g049640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g18841 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31282 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g19684 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e007231_P002 Zm00001e007231 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 40 90
No external refs found!