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  5. Cba_g10389

Cba_g10389


Description : component *(uL14) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10389
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00206470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT2G33370 No alias Ribosomal protein L14p/L23e family protein 0.03 OrthoFinder output from all 47 species
AT3G04400 emb2171 Ribosomal protein L14p/L23e family protein 0.02 OrthoFinder output from all 47 species
Adi_g048509 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g30194 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0509.g074710 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.06G080100.1 Ceric.06G080100 component *(uL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021290.9 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre04.g211800 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g34723 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028407001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56960.1 LOC_Os02g56960 component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g04590.1 LOC_Os03g04590 component RPL23 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os10g32920.1 LOC_Os10g32920 component RPL23 of LSU proteome component 0.05 OrthoFinder output from all 47 species
MA_10432200g0010 No alias component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pnu_g29312 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c27_860V3.1 Pp3c27_860 Ribosomal protein L14p/L23e family protein 0.01 OrthoFinder output from all 47 species
Solyc06g008170.3.1 Solyc06g008170 component RPL23 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc06g083780.3.1 Solyc06g083780 component RPL23 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc09g090610.3.1 Solyc09g090610 component RPL23 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g17111 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g03689 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e000323_P001 Zm00001e000323 component RPL23 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e038953_P001 Zm00001e038953 component RPL23 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
InterPro domains Description Start Stop
IPR000218 Ribosomal_L14P 22 140
No external refs found!