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  5. Cba_g10534

Cba_g10534


Description : component *(eL8) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10534

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00218360 evm_27.TU.AmTr_v1... 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
AMTR_s00047p00140090 evm_27.TU.AmTr_v1... 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00047p00140240 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
AT2G47610 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 OrthoFinder output from all 47 species
AT3G62870 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 OrthoFinder output from all 47 species
Adi_g117976 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aev_g02937 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g38500 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g55381 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g10465 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aspi01Gene23106.t1 Aspi01Gene23106 component *(eL8) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044550 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0148.g053103 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g46928 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Ceric.08G064100.1 Ceric.08G064100 component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.28G063900.1 Ceric.28G063900 component *(eL8) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000128.22 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Cre12.g529651 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dcu_g30506 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01008585001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01033050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01036540001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Gb_36761 No alias component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Gb_36922 No alias component RPL7a of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os08g23710.1 LOC_Os08g23710 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os09g32976.1 LOC_Os09g32976 component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Len_g31217 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g25988 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_109678g0010 No alias component RPL7a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp2g23250.1 No alias component RPL7a of LSU proteome component 0.07 OrthoFinder output from all 47 species
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Msp_g01446 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Nbi_g10842 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g02760 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g59570 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c26_330V3.1 Pp3c26_330 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 OrthoFinder output from all 47 species
Pp3c9_380V3.1 Pp3c9_380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013775 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g06600 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g09914 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g28791 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g28887 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Smo270545 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g097760.3.1 Solyc01g097760 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g050120.3.1 Solyc06g050120 component RPL7a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g10426 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g48863 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g40004 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Zm00001e010129_P001 Zm00001e010129 component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e034633_P002 Zm00001e034633 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 126 209
No external refs found!