Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00109p00094190 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00126p00080460 | OTP82,... | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G03380 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G14050 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G37570 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G65570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g36026 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03252 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04216 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04456 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06307 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07519 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14128 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14757 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15782 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18037 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19069 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26632 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26635 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30855 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54869 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55221 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g60956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22716 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24197 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27006 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27891 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28159 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37100 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g42859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g25847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g27362 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene60521.t1 | Aspi01Gene60521 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009167 | No alias | not classified & original description: CDS=1-2571 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g042964 | No alias | not classified & original description: CDS=1-1536 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1890.g107856 | No alias | not classified & original description: CDS=1-3162 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G042700.1 | Ceric.02G042700 | not classified & original description: pacid=50584264... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G010500.1 | Ceric.04G010500 | not classified & original description: pacid=50631555... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G051300.1 | CRR22, Ceric.04G051300 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G058700.1 | Ceric.05G058700 | not classified & original description: pacid=50578964... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G055500.1 | Ceric.07G055500 | not classified & original description: pacid=50626722... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G066400.1 | Ceric.11G066400 | not classified & original description: pacid=50596043... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G013800.1 | Ceric.14G013800 | not classified & original description: pacid=50633719... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z005100.1 | Ceric.1Z005100 | not classified & original description: pacid=50567700... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G080700.1 | Ceric.21G080700 | not classified & original description: pacid=50603857... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G051100.1 | Ceric.28G051100 | not classified & original description: pacid=50570532... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G044800.1 | Ceric.37G044800 | not classified & original description: pacid=50617007... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08816 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10909 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16544 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g32153 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38628 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g43123 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45929 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06719 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g25598 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g20638 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g20660 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22835 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23831 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29669 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018597001 | No alias | RNA processing.organelle machineries.RNA... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g03385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18910 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g33767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g36226 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g13946 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_121102g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_785826g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_7907g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g06173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23174 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25431 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26112 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g38399 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g11385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12406 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13622 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20392 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57327 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63828 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g23106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03245 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59292 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008668 | No alias | not classified & original description: CDS=1-2001 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13514 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14278 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26415 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27568 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo75659 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g079410.3.1 | Solyc04g079410 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01102 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06411 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09284 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21818 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g25192 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26623 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44315 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | HCCA |
| CC | GO:0000178 | exosome (RNase complex) | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 714 | 760 |
| IPR002885 | Pentatricopeptide_repeat | 619 | 679 |
| IPR002885 | Pentatricopeptide_repeat | 230 | 250 |
| IPR002885 | Pentatricopeptide_repeat | 430 | 454 |
| IPR002885 | Pentatricopeptide_repeat | 570 | 594 |
| IPR002885 | Pentatricopeptide_repeat | 357 | 403 |
| IPR002885 | Pentatricopeptide_repeat | 457 | 505 |
| IPR002885 | Pentatricopeptide_repeat | 256 | 304 |
| IPR002885 | Pentatricopeptide_repeat | 156 | 203 |
| No external refs found! |
