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  5. Cba_g10833

Cba_g10833 (SPL8)


Aliases : SPL8

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10833

Target Alias Description ECC score Gene Family Method Actions
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.04 OrthoFinder output from all 47 species
AT1G27360 SPL11 squamosa promoter-like 11 0.02 OrthoFinder output from all 47 species
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.02 OrthoFinder output from all 47 species
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.04 OrthoFinder output from all 47 species
AT3G15270 SPL5 squamosa promoter binding protein-like 5 0.03 OrthoFinder output from all 47 species
Adi_g029308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07305 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08078 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10909 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12656.t1 SPL8, Aspi01Gene12656 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G052200.1 SPL8, Ceric.39G052200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre10.g433350 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Dcu_g12554 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08477 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003836001 SPL12 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43322 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04942 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30310 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60401 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021215 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024918 SPL5 SBP-type transcription factor & original description: CDS=1-1335 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025410 No alias SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc01g090730.3.1 SPL8, Solyc01g090730 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g18018 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 258 331
No external refs found!