Cba_g11407

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g11407
Cluster	HCCA: Cluster_223

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00057700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00058p00210070	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT1G47655	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT3G55370	OBP3	OBF-binding protein 3	0.02	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Aev_g20056	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.19G013700.1	TMO6, Ceric.19G013700	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g02221	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12302	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13892	OBP1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01002242001	ADOF2, DOF2	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01027184001	DAG1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01034189001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01038591001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Gb_20144	HCA2, DOF5.6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g09720.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g55340.1	LOC_Os01g55340	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os01g64590.1	LOC_Os01g64590	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g07360.1	CDF3, LOC_Os03g07360	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g55610.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g03112	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.02	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc08g082910.2.1	Solyc08g082910	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Spa_g07056	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g01918	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004809_P001	CDF3, Zm00001e004809	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e016572_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Zm00001e023334_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e028672_P001	Zm00001e028672	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	72	127

External Links

No external refs found!

Cba_g11407

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation