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  5. Lfl_g31874

Lfl_g31874


Description : component *(eS24) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g31874
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00221450 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT3G04920 No alias Ribosomal protein S24e family protein 0.07 OrthoFinder output from all 47 species
AT5G28060 No alias Ribosomal protein S24e family protein 0.05 OrthoFinder output from all 47 species
Adi_g091014 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Adi_g102131 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g06783 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ala_g15047 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g17637 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011184 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0103.g044621 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g74583 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.39G012600.1 Ceric.39G012600 component *(eS24) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre10.g456200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Dac_g18502 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g17551 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g25341 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g27599 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01021860001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 47 species
Gb_38272 No alias component RPS24 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os01g52490.1 LOC_Os01g52490 component RPS24 of SSU proteome 0.08 OrthoFinder output from all 47 species
LOC_Os02g13530.1 LOC_Os02g13530 component RPS24 of SSU proteome 0.06 OrthoFinder output from all 47 species
LOC_Os06g36160.1 LOC_Os06g36160 component RPS24 of SSU proteome 0.06 OrthoFinder output from all 47 species
MA_119841g0010 No alias component RPS24 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp1g10680.1 No alias component RPS24 of SSU proteome 0.06 OrthoFinder output from all 47 species
Msp_g38789 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g39203 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Pir_g24432 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c12_10760V3.1 Pp3c12_10760 Ribosomal protein S24e family protein 0.04 OrthoFinder output from all 47 species
Pp3c12_10870V3.1 Pp3c12_10870 Ribosomal protein S24e family protein 0.02 OrthoFinder output from all 47 species
Pp3c13_22220V3.1 Pp3c13_22220 Ribosomal protein S24e family protein 0.02 OrthoFinder output from all 47 species
Pp3c3_19700V3.1 Pp3c3_19700 Ribosomal protein S24e family protein 0.02 OrthoFinder output from all 47 species
Ppi_g14489 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g24597 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g28244 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g09368 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sam_g12713 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12714 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31840 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Sam_g45993 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g47032 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g50017 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Smo227903 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Smo271584 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc01g097870.3.1 Solyc01g097870 component RPS24 of SSU proteome 0.04 OrthoFinder output from all 47 species
Solyc06g084230.3.1 Solyc06g084230 component RPS24 of SSU proteome 0.05 OrthoFinder output from all 47 species
Solyc09g065330.3.1 Solyc09g065330 component RPS24 of SSU proteome 0.02 OrthoFinder output from all 47 species
Tin_g29759 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e014422_P002 Zm00001e014422 component RPS24 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e019937_P001 Zm00001e019937 component RPS24 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e028203_P001 Zm00001e028203 component RPS24 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e030668_P001 Zm00001e030668 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016055 Wnt signaling pathway IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling IEP HCCA
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 48 125
No external refs found!