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  5. Cba_g12663

Cba_g12663 (ARS27A, RS27A)


Aliases : ARS27A, RS27A

Description : component *(eS27) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12663
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.07 OrthoFinder output from all 47 species
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.05 OrthoFinder output from all 47 species
Azfi_s0004.g008655 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.05G019300.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre02.g145250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g17983 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dde_g00057 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
GSVIVT01032964001 ARS27A, RS27A Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g40961 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_54625g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.04 OrthoFinder output from all 47 species
Pir_g56991 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g58415 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g63736 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_15840V3.1 Pp3c1_15840 ribosomal protein S27 0.02 OrthoFinder output from all 47 species
Pp3c22_18310V3.1 ARS27A, RS27A,... ribosomal protein S27 0.02 OrthoFinder output from all 47 species
Pp3c2_20540V3.1 ARS27A, RS27A,... ribosomal protein S27 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018215 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g16488 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g53353 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Tin_g24199 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e024704_P001 ARS27A, RS27A,... component RPS27 of SSU proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 77 131
No external refs found!