1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g12919

Cba_g12919 (ATGRAS2, SCL14, GRAS2)


Aliases : ATGRAS2, SCL14, GRAS2

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12919
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Adi_g115872 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32092 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G022700.1 Ceric.08G022700 GRAS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g43951 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09378 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46632 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11546 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019317_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 356 495
No external refs found!