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  5. Cba_g13543

Cba_g13543


Description : MYB-RELATED transcription factor *(MYB-R-R) & original description: none


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13543
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT1G70000 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.05 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Als_g10157 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aob_g22310 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.06 OrthoFinder output from all 47 species
Aop_g13795 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00651.t1 Aspi01Gene00651 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene05859.t1 Aspi01Gene05859 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15482.t1 Aspi01Gene15482 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038982 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021123.16 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Cre03.g198800 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
LOC_Os01g09280.1 LOC_Os01g09280 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09640.1 LOC_Os01g09640 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os08g04840.1 LOC_Os08g04840 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Len_g00582 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Len_g12267 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
MA_11322g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Pir_g17567 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g26384 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22164 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020560 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc04g005100.3.1 Solyc04g005100 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Solyc09g014250.3.1 Solyc09g014250 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Solyc11g006720.2.1 Solyc11g006720 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Spa_g26734 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e027835_P005 Zm00001e027835 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e028675_P001 Zm00001e028675 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e031755_P001 Zm00001e031755 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 106 151
No external refs found!