Cba_g13662


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13662

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00155650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
Adi_g002304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116059 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g36051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18332 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07542.t2 Aspi01Gene07542 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34109.t1 Aspi01Gene34109 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34514.t1 Aspi01Gene34514 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37985.t1 DOT4, Aspi01Gene37985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47602.t1 Aspi01Gene47602 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49892.t2 Aspi01Gene49892 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05295 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g17429 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20102 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29644 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29926 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67693 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36033 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g40970 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40971 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22519 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g47138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g02200.1 CRR22, LOC_Os06g02200 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
LOC_Os06g20870.1 LOC_Os06g20870 Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g44170.1 EMB2758, LOC_Os07g44170 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
LOC_Os11g24530.1 LOC_Os11g24530 Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
Lfl_g07580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436932g0010 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.05 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33082 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03793 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04648 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004036 OTP84 not classified & original description: CDS=1-1773 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005856 No alias not classified & original description: CDS=1-2292 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007537 No alias not classified & original description: CDS=117-2237 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007726 No alias not classified & original description: CDS=1-3696 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008323 No alias not classified & original description: CDS=476-3628 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010017 No alias not classified & original description: CDS=111-3410 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016873 No alias not classified & original description: CDS=1-2589 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019001 No alias not classified & original description: CDS=1-2865 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021130 No alias not classified & original description: CDS=1-2961 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021978 No alias not classified & original description: CDS=1-2700 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.02 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo101093 EMB2261 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.03 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15629 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g43745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45519 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!