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  5. Cba_g14097

Cba_g14097 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional co-repressor *(TPL/TPR) & original description: none


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14097
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT1G80490 TPR1 TOPLESS-related 1 0.02 OrthoFinder output from all 47 species
AT2G25420 No alias transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from all 47 species
Adi_g081386 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aob_g27611 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40866.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Dde_g03492 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g05960 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Gb_09668 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
MA_8686378g0010 TPR1 Protein TPR3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g15913 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020365 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Zm00001e008871_P001 TPR1, Zm00001e008871 Protein TPR3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e017248_P004 TPR2, Zm00001e017248 transcriptional repressor (TPL). transcriptional... 0.01 OrthoFinder output from all 47 species
Zm00001e038558_P003 TPR1, Zm00001e038558 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 456 490
IPR001680 WD40_repeat 923 955
No external refs found!