Cba_g14910


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14910

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00108030 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
AT4G10170 No alias SNARE-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G27840 No alias SNARE-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g02801 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G046400.1 Ceric.37G046400 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g15032 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
MA_40583g0020 No alias VAMP7-type R-type SNARE longin protein. non-SNARE-type... 0.02 OrthoFinder output from all 47 species
Msp_g25380 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028637_P003 Zm00001e028637 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 35 90
IPR042855 V_SNARE_CC 200 281
No external refs found!