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  5. Cba_g15401

Cba_g15401 (ATCNGC20, CNGC20, CNBT1)


Aliases : ATCNGC20, CNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15401
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00063110 DND1, ATCNGC2,... Solute transport.channels.VIC superfamily.cyclic... 0.05 OrthoFinder output from all 47 species
AT2G23980 ATCNGC6, CNGC6 cyclic nucleotide-gated channel 6 0.03 OrthoFinder output from all 47 species
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.04 OrthoFinder output from all 47 species
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.02 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.02 OrthoFinder output from all 47 species
AT5G53130 ATCNGC1, CNGC1 cyclic nucleotide gated channel 1 0.04 OrthoFinder output from all 47 species
Adi_g105580 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Ala_g13851 ATCNGC14, CNGC14 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036528 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0147.g053030 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063721 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Cba_g13170 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G068600.1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Dac_g37580 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04975 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01015970001 ATCNGC8, CNGC8 Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
GSVIVT01025208001 CNGC15, ATCNGC15 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
GSVIVT01027087001 ATCNGC1, CNGC1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
GSVIVT01028711001 ATCNGC1, CNGC1 Solute transport.channels.VIC superfamily.cyclic... 0.04 OrthoFinder output from all 47 species
Gb_32552 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41710.1 CNGC15,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
LOC_Os06g08850.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os09g38580.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Len_g11559 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Lfl_g07966 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
MA_167620g0010 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel (CNGC).... 0.03 OrthoFinder output from all 47 species
Mp4g04110.1 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Mp4g11640.1 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Mp6g01920.1 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Msp_g24602 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Msp_g26614 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01203 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Pir_g29423 ATCNGC1, CNGC1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Pir_g31848 ATCNGC10, CNGC10, ACBK1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47165 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Sam_g30209 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Sam_g36093 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Sam_g39902 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Smo113786 ATCNGC9, CNGC9 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Smo266514 CNGC15, ATCNGC15 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Solyc03g098210.4.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc07g005590.3.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc07g006510.3.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Spa_g00978 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Tin_g02085 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Zm00001e011591_P002 CNGC18,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Zm00001e030701_P001 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 190 515
No external refs found!