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  5. Cba_g15454

Cba_g15454


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15454
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00081210 AT-TCP20, TCP20,... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00171910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.07 OrthoFinder output from all 47 species
AT1G35560 No alias TCP family transcription factor 0.04 OrthoFinder output from all 47 species
AT1G69690 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
AT1G72010 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.1 OrthoFinder output from all 47 species
AT3G27010 AT-TCP20, TCP20,... TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.02 OrthoFinder output from all 47 species
AT5G08330 No alias TCP family transcription factor 0.05 OrthoFinder output from all 47 species
Adi_g055980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059260 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115586 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06733 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46523 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene06134.t1 AtTCP14, TCP14,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72040.t1 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07691 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26686 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Gb_23937 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g43160.1 LOC_Os08g43160 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g07480.1 LOC_Os12g07480 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Nbi_g24235 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50317 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23602 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27632 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03941 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g068200.1.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.01 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Solyc04g009180.3.1 Solyc04g009180 transcription factor (TCP). CHE circadian clock repression factor 0.04 OrthoFinder output from all 47 species
Solyc09g008030.1.1 Solyc09g008030 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc11g020670.1.1 Solyc11g020670 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e023066_P001 Zm00001e023066 transcription factor (TCP). CHE circadian clock repression factor 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 219 324
No external refs found!