1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g15515

Cba_g15515 (CLC-E, ATCLC-E, CLCE)


Aliases : CLC-E, ATCLC-E, CLCE

Description : anion channel / anion:proton antiporter *(CLC) & original description: none


Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15515

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00086940 CLC-E, ATCLC-E,... Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021094.10 CLC-E, ATCLC-E, CLCE Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Cre01.g037150 ATCLC-F, CLCF, CLC-F Solute transport.carrier-mediated transport.CLC anion... 0.02 OrthoFinder output from all 47 species
Dde_g12030 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Lfl_g07884 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Mp1g20640.1 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Msp_g14773 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Nbi_g01393 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ore_g19490 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Pp3c23_11730V3.1 ATCLC-F, CLCF,... chloride channel F 0.03 OrthoFinder output from all 47 species
Smo101001 CLC-E, ATCLC-E, CLCE Solute transport.carrier-mediated transport.CLC anion... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 781 827
IPR000644 CBS_dom 700 746
IPR001807 Cl-channel_volt-gated 270 599
No external refs found!