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  5. Cba_g16021

Cba_g16021


Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16021

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00032460 PIL5, PIF1,... External stimuli response.light.red/far red light.PIF... 0.02 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.03 OrthoFinder output from all 47 species
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 OrthoFinder output from all 47 species
AT2G18300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 OrthoFinder output from all 47 species
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 OrthoFinder output from all 47 species
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012121 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085081 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aev_g17229 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ala_g21810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26152 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g06024 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aop_g08826 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14421 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54623.t1 LRL3, Aspi01Gene54623 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62580.t1 Aspi01Gene62580 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038807 HEC1 bHLH-type transcription factor & original description: CDS=1-1287 0.04 OrthoFinder output from all 47 species
Azfi_s0113.g045847 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Azfi_s0173.g055808 SPT bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0319.g064443 RSL2 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g17686 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.08G020500.1 RSL2, Ceric.08G020500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G086200.1 RSL2, Ceric.18G086200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z049600.1 Ceric.1Z049600 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dcu_g05640 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06439 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dde_g15552 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05767 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000717001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01009357001 RSL2 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_21260 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Gb_21366 UNE12 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22201 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_27869 HEC1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61480.1 LOC_Os01g61480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os03g10770.1 RSL2, LOC_Os03g10770 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08500.1 LRL3, LOC_Os06g08500 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32510.1 LOC_Os09g32510 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39850.1 RSL4, LOC_Os12g39850 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g03281 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10068 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Len_g13542 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g38702 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Lfl_g39480 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_100071g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_138148g0010 RHD6 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
MA_158850g0010 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_52085g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Mp6g21470.1 RSL2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g15071 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g16756 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25662 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g44492 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g01951 UNE12 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.03 OrthoFinder output from all 47 species
Pnu_g09963 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_17000V3.1 LRL1, Pp3c17_17000 LJRHL1-like 1 0.01 OrthoFinder output from all 47 species
Pp3c20_590V3.1 CIB5, Pp3c20_590 cryptochrome-interacting basic-helix-loop-helix 5 0.02 OrthoFinder output from all 47 species
Ppi_g13554 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g33350 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62088 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g63750 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013890 LRL1 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018070 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sam_g48191 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48598 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107140.3.1 Solyc01g107140 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g005220.3.1 Solyc04g005220 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc12g088380.1.1 RSL2, Solyc12g088380 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g11218 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23827 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51777 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Spa_g51940 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57226 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19138 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Zm00001e011866_P002 UNE12, Zm00001e011866 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e019392_P001 Zm00001e019392 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e025656_P001 RHD6, Zm00001e025656 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e028489_P003 Zm00001e028489 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e030725_P001 Zm00001e030725 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e032950_P002 UNE12, Zm00001e032950 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034605_P003 Zm00001e034605 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e035422_P001 RSL4, Zm00001e035422 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e038765_P001 Zm00001e038765 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 455 502
No external refs found!