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  5. Cba_g16326

Cba_g16326


Description : not classified & original description: none


Gene families : OG0000672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16326

Target Alias Description ECC score Gene Family Method Actions
Adi_g038863 ATHPCAT2, HAC1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g087908 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g22443 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Aob_g29159 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g09088 HAC12 component *(KIX) of PPD-KIX transcriptional repressor... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13264.t1 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48400.t2 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.03 OrthoFinder output from all 47 species
Cba_g05988 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.04 OrthoFinder output from all 47 species
Cba_g67739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.25G044800.1 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Dac_g28512 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.04 OrthoFinder output from all 47 species
Dde_g02407 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g30076 HAC12 component *(KIX) of PPD-KIX transcriptional repressor... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008718 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Smo180368 HAC12 RNA biosynthesis.transcriptional activation.TAZ histone... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!