Cba_g16600 (emb1354, CDC48C)


Aliases : emb1354, CDC48C

Description : platform ATPase CDC48 & original description: none


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16600

Target Alias Description ECC score Gene Family Method Actions
AT5G03340 No alias ATPase, AAA-type, CDC48 protein 0.03 OrthoFinder output from all 47 species
Als_g38557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012482 No alias platform ATPase CDC48 & original description: CDS=1-2658 0.03 OrthoFinder output from all 47 species
Cba_g10573 No alias platform ATPase CDC48 & original description: none 0.04 OrthoFinder output from all 47 species
Cre06.g269950 No alias Cell division control protein 48 homolog E... 0.01 OrthoFinder output from all 47 species
Ehy_g09970 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g31870.1 LOC_Os08g31870 platform ATPase (CDC48) 0.04 OrthoFinder output from all 47 species
MA_10427538g0010 No alias Cell division control protein 48 homolog E... 0.03 OrthoFinder output from all 47 species
Ore_g03860 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR031996 NVL2_nucleolin-bd 20 82
IPR003959 ATPase_AAA_core 428 574
IPR003959 ATPase_AAA_core 768 896
IPR041569 AAA_lid_3 599 630
IPR041569 AAA_lid_3 919 957
No external refs found!