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  5. Cba_g17291

Cba_g17291


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17291

Target Alias Description ECC score Gene Family Method Actions
Ala_g08775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G087200.1 Ceric.13G087200 not classified & original description: pacid=50636863... 0.02 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.02 OrthoFinder output from all 47 species
Cre15.g634750 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g68650.1 LOC_Os01g68650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g01762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g23920.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g38624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g082980.3.1 Solyc09g082980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 127 348
No external refs found!