1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g17331

Cba_g17331 (AGL9, SEP3)


Aliases : AGL9, SEP3

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17331

Target Alias Description ECC score Gene Family Method Actions
AT4G37940 AGL21 AGAMOUS-like 21 0.03 OrthoFinder output from all 47 species
Als_g11193 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28471 SHP2, AGL5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30277 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47147 AGL42 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59584 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29967 AGL16 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dde_g50123 AGL3, SEP4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os02g45770.1 AGL6, LOC_Os02g45770 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Len_g22235 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20675 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09699 GL19, AGL19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19814 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g36826 AGL65 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g29613 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33044 AGL42 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo437868 AGL29 RNA biosynthesis.transcriptional activation.MADS box... 0.07 OrthoFinder output from all 47 species
Tin_g20318 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 146 230
IPR002100 TF_MADSbox 70 117
No external refs found!