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  5. Cba_g17387

Cba_g17387


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17387

Target Alias Description ECC score Gene Family Method Actions
Ala_g02542 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18590 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27548 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03570 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07219 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22309.t1 Aspi01Gene22309 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G008600.1 Ceric.13G008600 subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g10865 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19285 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01674 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06144 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06170 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09211 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19634 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01036869001 ABCG14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os11g07600.1 ABCG25,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_4863g0010 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp3g19930.1 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g10212 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25470 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15519 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16739 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06555 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14611 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35119 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23153 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040163_P001 ABCG14, Zm00001e040163 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 222 374
IPR013525 ABC_2_trans 548 757
No external refs found!