Cba_g18528


Description : not classified & original description: none


Gene families : OG0005649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005649_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18528

Target Alias Description ECC score Gene Family Method Actions
AT5G20140 No alias SOUL heme-binding family protein 0.08 OrthoFinder output from all 47 species
Adi_g022351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33908 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g23265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01251 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21349 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene27280.t1 Aspi01Gene27280 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.37G062400.1 Ceric.37G062400 not classified & original description: pacid=50616994... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.118 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.136 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021244.41 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g304400 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dcu_g39518 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g21657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015471001 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.06 OrthoFinder output from all 47 species
Gb_04672 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.08 OrthoFinder output from all 47 species
LOC_Os06g39690.1 LOC_Os06g39690 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g04218 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_85577g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g02650.1 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g25470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09463 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15765 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g19149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo438881 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc12g006805.1.1 Solyc12g006805 Heme-binding-like protein At3g10130, chloroplastic... 0.05 OrthoFinder output from all 47 species
Zm00001e037352_P002 Zm00001e037352 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 96 205
IPR006917 SOUL_haem-bd 238 402
No external refs found!