Aliases : ATSS4, SS4, SSIV
Description : starch synthase *(SS5) & original description: none
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g18815 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g087898 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12175 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02168 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01991 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g08030.1 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17105 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07616 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43473 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0222.g026242 | ATSS3, SS3 | starch synthase *(SS3) & original description: CDS=271-2166 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12030 | No alias | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51044 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | HCCA |
| MF | GO:0004424 | imidazoleglycerol-phosphate dehydratase activity | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006547 | histidine metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013534 | Starch_synth_cat_dom | 244 | 484 |
| No external refs found! |
