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  5. Cba_g18820

Cba_g18820 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : class-II histone deacetylase & original description: none


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18820

Target Alias Description ECC score Gene Family Method Actions
Adi_g008818 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06072 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14691 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059804 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: CDS=132-2222 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060221 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=93-1925 0.02 OrthoFinder output from all 47 species
Ceric.18G066800.1 ATHDA15, HDA15,... class-II histone deacetylase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g16605 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21981 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01843 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14604 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
Lfl_g05654 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g20110.1 ATHDA15, HDA15 class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
Pir_g10819 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09864 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16921 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009048 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=178-1890 0.02 OrthoFinder output from all 47 species
Spa_g07852 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08286 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 261 549
No external refs found!