Cba_g19280


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19280

Target Alias Description ECC score Gene Family Method Actions
Aev_g42174 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13495 MEF22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33463 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16738 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63664 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15988.t1 Aspi01Gene15988 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G036800.1 Ceric.04G036800 not classified & original description: pacid=50632550... 0.02 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.04 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.04 OrthoFinder output from all 47 species
Ceric.23G075200.1 Ceric.23G075200 not classified & original description: pacid=50610693... 0.04 OrthoFinder output from all 47 species
Ceric.26G013000.1 Ceric.26G013000 not classified & original description: pacid=50600010... 0.04 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.04 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.02 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Cre12.g483720 No alias Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g25281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42748 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02806 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15555 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g20970 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24873 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25754 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28521 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g18801 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18987 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33498 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44820 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02817 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57077 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09360 LOI1, MEF11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30840 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32073 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53028 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001920 OTP86 not classified & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003965 No alias not classified & original description: CDS=1-4143 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.02 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo26969 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26279 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45696 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53135 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12958 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26742 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 484 502
IPR002885 Pentatricopeptide_repeat 381 404
IPR002885 Pentatricopeptide_repeat 103 149
IPR002885 Pentatricopeptide_repeat 306 353
IPR002885 Pentatricopeptide_repeat 205 251
IPR002885 Pentatricopeptide_repeat 406 453
No external refs found!