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  5. Cba_g19882

Cba_g19882 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19882

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110647 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36487 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26657 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.01 OrthoFinder output from all 47 species
Azfi_s0008.g011443 No alias not classified & original description: CDS=1-2145 0.02 OrthoFinder output from all 47 species
Ceric.03G031800.1 Ceric.03G031800 not classified & original description: pacid=50573080... 0.03 OrthoFinder output from all 47 species
Ceric.04G034400.1 Ceric.04G034400 not classified & original description: pacid=50632280... 0.03 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.03 OrthoFinder output from all 47 species
Ceric.13G010300.1 Ceric.13G010300 not classified & original description: pacid=50636329... 0.02 OrthoFinder output from all 47 species
Ceric.21G030500.1 Ceric.21G030500 not classified & original description: pacid=50603713... 0.02 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.03 OrthoFinder output from all 47 species
Ceric.30G005600.1 Ceric.30G005600 not classified & original description: pacid=50608549... 0.01 OrthoFinder output from all 47 species
Dcu_g07066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07600 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g08313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21452 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g33337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g45798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g03935 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04388 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22352 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26478 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50292 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029885001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g01115.1 LOC_Os01g01115 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05665 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428509g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
MA_104937g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.01 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
MA_81514g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_935792g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.01 OrthoFinder output from all 47 species
Msp_g26098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g12725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g27960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g41649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43972 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g08638 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32595 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16158 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05872 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g53727 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007853 No alias not classified & original description: CDS=1-1137 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021049 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2289 0.02 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo51483 CRR22 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Spa_g04262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14609 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55586 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g55587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g06658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09854 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17314 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29126 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 683 707
IPR002885 Pentatricopeptide_repeat 524 581
IPR002885 Pentatricopeptide_repeat 196 243
IPR002885 Pentatricopeptide_repeat 297 344
IPR002885 Pentatricopeptide_repeat 398 445
IPR032867 DYW_dom 714 804
IPR002885 Pentatricopeptide_repeat 470 500
IPR046848 E_motif 616 678
No external refs found!