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  5. Cba_g20056

Cba_g20056


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20056
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00095090 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00245p00017720 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G50760 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
Ala_g05295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45418.t1 Aspi01Gene45418 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z024100.1 Ceric.1Z024100 not classified & original description: pacid=50637166... 0.02 OrthoFinder output from all 47 species
Ceric.1Z196600.1 Ceric.1Z196600 not classified & original description: pacid=50613686... 0.02 OrthoFinder output from all 47 species
Ceric.1Z196800.1 Ceric.1Z196800 not classified & original description: pacid=50613688... 0.02 OrthoFinder output from all 47 species
Ceric.1Z272500.1 Ceric.1Z272500 not classified & original description: pacid=50576979... 0.02 OrthoFinder output from all 47 species
Dac_g33508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_29894 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g48860.1 LOC_Os06g48860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32984.1 LOC_Os09g32984 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo418753 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g110580.2.1 Solyc01g110580 Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g056440.3.1 Solyc05g056440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g053290.1.1 Solyc06g053290 Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g072650.1.1 Solyc06g072650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g22862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023802_P001 Zm00001e023802 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030179_P001 Zm00001e030179 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 47 118
No external refs found!