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  5. Cba_g20220

Cba_g20220


Description : BBX class-III transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20220

Target Alias Description ECC score Gene Family Method Actions
AT5G57180 CIA2 chloroplast import apparatus 2 0.02 OrthoFinder output from all 47 species
Adi_g075719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05448 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08686 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20729 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0172.g055744 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Ceric.16G076600.1 Ceric.16G076600 not classified & original description: pacid=50589566... 0.04 OrthoFinder output from all 47 species
Dcu_g23913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010855001 CIA2 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49880.1 LOC_Os02g49880 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Lfl_g06152 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17180 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_96860g0010 CIA2 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Msp_g47217 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19039 No alias BBX class-III transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15685 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Solyc04g007210.3.1 Solyc04g007210 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Tin_g13911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20168 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030952_P002 Zm00001e030952 transcription factor (BBX-CO) 0.05 OrthoFinder output from all 47 species
Zm00001e036760_P001 Zm00001e036760 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008610 lipid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 19 61
IPR010402 CCT_domain 465 507
No external refs found!