Cba_g20395


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20395

Target Alias Description ECC score Gene Family Method Actions
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.02 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04389 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13985 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14586.t2 Aspi01Gene14586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36110.t1 CRR22, Aspi01Gene36110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007907 No alias not classified & original description: CDS=160-2841 0.02 OrthoFinder output from all 47 species
Cba_g06916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G068200.1 OTP86, Ceric.04G068200 not classified & original description: pacid=50632337... 0.03 OrthoFinder output from all 47 species
Ceric.08G020400.1 OTP84, Ceric.08G020400 not classified & original description: pacid=50638334... 0.04 OrthoFinder output from all 47 species
Ceric.22G004400.1 Ceric.22G004400 not classified & original description: pacid=50613941... 0.03 OrthoFinder output from all 47 species
Ceric.30G012500.1 Ceric.30G012500 not classified & original description: pacid=50608997... 0.03 OrthoFinder output from all 47 species
Ceric.34G009900.1 Ceric.34G009900 not classified & original description: pacid=50623876... 0.03 OrthoFinder output from all 47 species
Dac_g16952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15639 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os03g55840.1 LOC_Os03g55840 Pentatricopeptide repeat-containing protein DWY1,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28899 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.02 OrthoFinder output from all 47 species
Solyc07g008890.3.1 Solyc07g008890 Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 17 65
IPR002885 Pentatricopeptide_repeat 93 115
No external refs found!