Cba_g20670


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20670

Target Alias Description ECC score Gene Family Method Actions
AT2G13600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g026470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099216 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13795 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44160 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16641 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07040 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70862 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34780.t1 Aspi01Gene34780 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57016.t1 Aspi01Gene57016 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07437 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g36311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G084700.1 VAC1, ECB2,... not classified & original description: pacid=50592179... 0.05 OrthoFinder output from all 47 species
Ceric.02G071400.1 Ceric.02G071400 not classified & original description: pacid=50584970... 0.05 OrthoFinder output from all 47 species
Dac_g05541 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35207 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g44133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10321 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g35950 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01008721001 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.06 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.05 OrthoFinder output from all 47 species
LOC_Os01g10090.1 LOC_Os01g10090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01610.1 LOC_Os02g01610 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Len_g01382 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g08349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g06624 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_121102g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03793 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014176 No alias not classified & original description: CDS=1-2259 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019261 No alias not classified & original description: CDS=1-3048 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021932 No alias not classified & original description: CDS=1-3567 0.04 OrthoFinder output from all 47 species
Smo76411 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Solyc09g009950.4.1 Solyc09g009950 RNA editing factor (MEF10) 0.02 OrthoFinder output from all 47 species
Solyc11g040060.3.1 EMB2758, Solyc11g040060 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18026 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000621_P001 CRR22, Zm00001e000621 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 77 122
IPR002885 Pentatricopeptide_repeat 152 175
IPR002885 Pentatricopeptide_repeat 180 209
No external refs found!