Cba_g20848 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20848

Target Alias Description ECC score Gene Family Method Actions
Als_g03235 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07456 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61873 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0283.g063072 No alias not classified & original description: CDS=1-2475 0.03 OrthoFinder output from all 47 species
Cba_g29760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G067800.1 Ceric.07G067800 not classified & original description: pacid=50627089... 0.03 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.03 OrthoFinder output from all 47 species
Dac_g30402 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08575 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08595 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g41011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45843 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_04886 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_26158 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.04 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo131170 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc07g005850.3.1 Solyc07g005850 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06092 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19926 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 324 372
IPR002885 Pentatricopeptide_repeat 425 473
IPR002885 Pentatricopeptide_repeat 224 271
IPR046848 E_motif 544 605
IPR002885 Pentatricopeptide_repeat 501 524
IPR002885 Pentatricopeptide_repeat 24 53
IPR032867 DYW_dom 649 733
No external refs found!