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  5. Cba_g21836

Cba_g21836 (BRIZ2)


Aliases : BRIZ2

Description : E3 ubiquitin ligase *(BRIZ) & original description: none


Gene families : OG0004050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g21836

Target Alias Description ECC score Gene Family Method Actions
Aop_g03802 BRIZ2 E3 ubiquitin ligase *(BRIZ) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02972 BRIZ2 E3 ubiquitin ligase *(BRIZ) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01202 BRIZ2 E3 ubiquitin ligase *(BRIZ) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28593 No alias E3 ubiquitin ligase *(BRIZ) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006757_P002 BRIZ1, Zm00001e006757 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e013868_P001 BRIZ2, Zm00001e013868 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 239 280
IPR011422 BRAP2/ETP1_RRM 131 227
IPR001607 Znf_UBP 291 350
No external refs found!