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  5. Cba_g22394

Cba_g22394


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22394
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G71960 ABCG25, ATABCG25 ATP-binding casette family G25 0.03 OrthoFinder output from all 47 species
AT3G25620 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g088059 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63592 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69897.t1 ABCG26, WBC27,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71266.t1 Aspi01Gene71266 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26786 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g06139.1 LOC_Os03g06139 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os08g07010.1 ABCG14, LOC_Os08g07010 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os11g07600.1 ABCG25,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Msp_g14978 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29010 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.03 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 385 445
IPR003439 ABC_transporter-like_ATP-bd 206 356
IPR013525 ABC_2_trans 523 732
No external refs found!