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  5. Cba_g23067

Cba_g23067


Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23067

Target Alias Description ECC score Gene Family Method Actions
Ala_g29168 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30898 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29384 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21708 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72636.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16296 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16289 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024931001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.06 OrthoFinder output from all 47 species
GSVIVT01024932001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Gb_29764 No alias transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50060.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os12g38490.1 LOC_Os12g38490 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Solyc05g053090.2.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e020944_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 300 668
No external refs found!