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  5. Cba_g23300

Cba_g23300


Description : not classified & original description: none


Gene families : OG0000351 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23300
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Ala_g04561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05081 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g05824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g20986 RLP24, AtRLP24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68672 EFR not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45056.t1 GSO2, EDA23,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55340.t2 AtRLP35, RLP35,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60912.t1 Aspi01Gene60912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66221.t1 RLP21, AtRLP21,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21479 RLP13, AtRLP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43241 AtRLP54, RLP54 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17715 RLP32, AtRLP32 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51821 RLP53, AtRLP53 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25359 RLP27, AtRLP27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 185 245
IPR001611 Leu-rich_rpt 443 502
IPR001611 Leu-rich_rpt 687 706
IPR001611 Leu-rich_rpt 641 661
IPR013210 LRR_N_plant-typ 61 96
No external refs found!