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  5. Cba_g23591

Cba_g23591


Description : SSU processome assembly factor *(UTP10) & original description: none


Gene families : OG0003994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23591

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00089410 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
AT3G06530 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g19835 No alias SSU processome assembly factor *(UTP10) & original... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000074.2 No alias Uncharacterized protein At3g06530 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g07825 No alias SSU processome assembly factor *(UTP10) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07784 No alias SSU processome assembly factor *(UTP10) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013976001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_31968 No alias Uncharacterized protein At3g06530 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os04g46310.1 LOC_Os04g46310 SSU processome assembly factor (UTP10) 0.04 OrthoFinder output from all 47 species
Lfl_g18330 No alias SSU processome assembly factor *(UTP10) & original... 0.02 OrthoFinder output from all 47 species
Mp1g06160.1 No alias SSU processome assembly factor (UTP10) 0.02 OrthoFinder output from all 47 species
Ore_g15147 No alias SSU processome assembly factor *(UTP10) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g32298 No alias SSU processome assembly factor *(UTP10) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018710 No alias phosphatidylinositol 4-kinase *(PI4K-gamma) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016831_P001 Zm00001e016831 SSU processome assembly factor (UTP10) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR012954 BP28_C_dom 1870 2041
IPR022125 U3snoRNP10_N 231 354
No external refs found!