1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g24608

Cba_g24608


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24608

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00048210 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00226120 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00059p00172960 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00131p00054800 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G16750 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT2G23700 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
AT4G37080 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g008972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g21128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32505.t1 Aspi01Gene32505 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46206.t1 Aspi01Gene46206 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66708.t1 Aspi01Gene66708 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007854 No alias not classified & original description: CDS=424-2331 0.06 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.06 OrthoFinder output from all 47 species
Azfi_s0099.g044141 No alias not classified & original description: CDS=527-2509 0.04 OrthoFinder output from all 47 species
Cba_g38369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g58052 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.05 OrthoFinder output from all 47 species
Ceric.12G063900.1 Ceric.12G063900 not classified & original description: pacid=50600480... 0.05 OrthoFinder output from all 47 species
Ceric.14G094300.1 Ceric.14G094300 not classified & original description: pacid=50633652... 0.03 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.03 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001956001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01004457001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01004717001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025228001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_10011 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_16429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g13130.2 LOC_Os03g13130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03140.1 LOC_Os07g03140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_124933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_90792g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_98673g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g02200.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15458 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001935 No alias not classified & original description: CDS=1-2133 0.05 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo424121 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo74798 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g065480.2.1 Solyc02g065480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g051030.2.1 Solyc10g051030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26920 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e009970_P005 Zm00001e009970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e034560_P003 Zm00001e034560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 34 114
No external refs found!