Cba_g24685 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g24685
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00145410	ATWRKY50,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00078p00171140	ATWRKY13,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G13960	WRKY4	WRKY DNA-binding protein 4	0.02	OrthoFinder output from all 47 species
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.03	OrthoFinder output from all 47 species
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.02	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	OrthoFinder output from all 47 species
Adi_g021792	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g109927	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g13886	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66845.t2	WRKY42,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0050.g031134	AtWRKY20, WRKY20	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.1Z119500.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.25G052100.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.35G059800.1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.39G056400.1	WRKY26, Ceric.39G056400	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g27869	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g24199	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g11334	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012196001	ATWRKY57, WRKY57	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01035965001	WRKY32, ATWRKY32	RNA biosynthesis.transcriptional activation.WRKY...	0.01	OrthoFinder output from all 47 species
LOC_Os01g62510.1	ATWRKY57,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
LOC_Os03g20550.1	WRKY46,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g29076	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_381058g0010	WRKY18, ATWRKY18	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Pir_g04293	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g53309	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019809	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1077	0.03	OrthoFinder output from all 47 species
Sam_g28344	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29317	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g32808	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34683	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34694	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g104550.3.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Solyc07g056280.3.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g16109	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37337	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e011098_P001	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e016623_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027301_P001	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027460_P001	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e030443_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	383	439

External Links

No external refs found!

Cba_g24685 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation