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  5. Cba_g24750

Cba_g24750


Description : not classified & original description: none


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24750
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g009827 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068213 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23333 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33199 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38804 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49602 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56525 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62231 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67464 No alias classical arabinogalactan protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02395.t1 ORF240B, Aspi01Gene02395 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07374.t1 CRK8, Aspi01Gene07374 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17543.t1 CRK8, Aspi01Gene17543 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene35832.t1 ORF240B, Aspi01Gene35832 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43085.t1 CRK8, Aspi01Gene43085 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48679.t1 CRK8, Aspi01Gene48679 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49472.t1 Aspi01Gene49472 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31827 ORF240B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60324 ORF170 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20239 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32704 ORF170 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g46477 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31977 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28737 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15750 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Len_g08698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21350 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20021 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22833 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25314 ORF240B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_20500V3.1 Pp3c12_20500 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c6_28960V3.1 Pp3c6_28960 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Ppi_g53697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54813 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55199 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56427 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14428 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27543 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 5 64
IPR013103 RVT_2 72 128
No external refs found!