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  5. Cba_g25028

Cba_g25028


Description : not classified & original description: none


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25028

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00121850 RHS8,... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.01 OrthoFinder output from all 47 species
AT1G63450 RHS8 root hair specific 8 0.01 OrthoFinder output from all 47 species
AT2G32740 ATGT13, GT13 galactosyltransferase 13 0.02 OrthoFinder output from all 47 species
Adi_g017997 GT18, ATGT18 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g079275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108577 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13604 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.01 OrthoFinder output from all 47 species
Als_g07662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32287 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene15481.t1 GT18, ATGT18,... galactosyltransferase *(XLT2) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene29322.t1 MUR3, KAM1,... 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene41418.t1 Aspi01Gene41418 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65094.t1 ATGT13, GT13,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67024.t1 Aspi01Gene67024 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67025.t1 Aspi01Gene67025 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0127.g048682 No alias not classified & original description: CDS=644-2323 0.03 OrthoFinder output from all 47 species
Cba_g03928 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g29050 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g43194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z125100.1 Ceric.1Z125100 not classified & original description: pacid=50582244... 0.02 OrthoFinder output from all 47 species
Ceric.1Z207600.1 Ceric.1Z207600 not classified & original description: pacid=50604528... 0.06 OrthoFinder output from all 47 species
Dac_g07922 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25023 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g34183 No alias galacturonosyltransferase *(XUT1) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g07343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g09772 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g12520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g26388 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.01 OrthoFinder output from all 47 species
LOC_Os03g05070.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.01 OrthoFinder output from all 47 species
LOC_Os03g05110.1 MUR3, KAM1,... UDP-galactose-dependent 1,2-beta-galactosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os06g23420.1 GT18, ATGT18,... Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os10g32080.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.01 OrthoFinder output from all 47 species
LOC_Os12g12290.1 LOC_Os12g12290 Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
Len_g07401 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g09002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15220 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08741 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_371148g0010 MUR3, KAM1 Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.01 OrthoFinder output from all 47 species
MA_9990400g0010 RHS8 xyloglucan galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Mp1g17340.1 No alias Probable xyloglucan galactosyltransferase GT15... 0.01 OrthoFinder output from all 47 species
Msp_g29118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37133 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41625 GT18, ATGT18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07815 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g19634 MUR3, KAM1 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16296 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g28905 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16473 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g33479 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011257 RHS8 not classified & original description: CDS=1-1668 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018133 No alias not classified & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Sam_g19823 No alias galactosyltransferase *(XLT2) & original description: none 0.01 OrthoFinder output from all 47 species
Smo101237 MUR3, KAM1 Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.05 OrthoFinder output from all 47 species
Solyc08g080930.1.1 RHS8, Solyc08g080930 xyloglucan galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.01 OrthoFinder output from all 47 species
Spa_g00754 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04915 GT18, ATGT18 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14538 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 150 487
No external refs found!