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  5. Cba_g25585

Cba_g25585 (OBP4)


Aliases : OBP4

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25585

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00099150 CDF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113667 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04142 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g18876 TMO6 transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.02 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g02618 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10863 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11850 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44800 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03345 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26661 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30636 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002242001 ADOF2, DOF2 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01034189001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
LOC_Os01g15900.1 CDF2, LOC_Os01g15900 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g48290.1 LOC_Os01g48290 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47810.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29960.1 ADOF2, DOF2,... transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Len_g11115 DAG1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g39179 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47967 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26540 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05155 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53347 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715 TMO6 transcription factor *(DOF) & original description: CDS=1-1413 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.02 OrthoFinder output from all 47 species
Sam_g26799 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g076850.2.1 Solyc02g076850 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g090220.3.1 OBP1, Solyc02g090220 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g062520.1.1 ADOF1, DOF1,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Spa_g05594 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e005107_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e009303_P001 TMO6, Zm00001e009303 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e010022_P001 OBP1, Zm00001e010022 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e020190_P001 Zm00001e020190 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e027411_P001 Zm00001e027411 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e028672_P001 Zm00001e028672 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e035892_P001 CDF2, Zm00001e035892 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 45 102
No external refs found!